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Sunday 29 May 2011

COPYRIGHTED PROJECTS

Dear Readers/Followers,

I am pleased to inform you that the following projects submitted in the Bioinformatics Laboratory, Applied Botany Center, Gujarat University, Ahmedadbad is a part of the progressive projects developed in this Center with our research group. If you found any contents or disclosure of such titles for endorsement in public domain, it should be considered as 'Copyright Infringement' and no part can be reproduced in any means without the consent from the department and from me. Modifying the titles is also not allowed.
Any guide/co-guide are not involved in this projects.

KINDLY UNDERSTAND THAT THE PROJECTS MENTIONED BELOW ARE NOT DISTRIBUTED UNDER CREATIVE COMMON RIGHTS. Thank You.

1. Plant Bioactive Driven Fragment-based Drug Designing and Epitope-based Immunoinformatics Study of EspC protein of Mycobacterium tuberculosis  (Techniques : Fragment-based Drug Designing, Immunoinformatics)

2.2D-QSAR Analysis of Dihydrofolate reductase (DHFR) inhibitors with activity in Toxoplasma gondii and Lactobacillus casei  (Techniques : 2D-QSAR)

3. Pharmacophore-assisted Molecular Optimization of Calcineurin Inhibitors for Human Prion      Disease (Techniques : Molecular Docking, Pharmacophore Mapping, Manual Interpretation [Copyrighted protocol])

4. Biocomputational Analysis of Citrullinated Filaggrin Repeats for Rheumatoid Arthritis  (Techniques : Electrostatic Potential, Antigencity)

Wednesday 4 May 2011

Concepts in Bioinformatics- All together in PPTS

Here, I am making it very easy to navigate and understand the key concepts of the hot spots topics.


Bioinformatics Practicals- A Complete Illustrated Guide to Beginners
Epitope Prediction and its Algorithms
Gene Order/Synteny
Virtual Library Screening (VLS)
The Mechanism of Protein Folding
Sequence Alignment and its Algorithms
SAGE technology
Proteome Databases
Protein-Protein Interactions
Protein-DNA Interactions
Protein-DNA Interactions –An Illustrated Example
Primary Databases-NCBI
Pharmacophore Identification
Bibliographical Databases- MEDLINE
In silico drug design an intro
Identification of disease genes
Genomics Application using GRAMENE
Gene Expression Profiling – Part I
Gene Expression Profiling – Part II
Fragment Based Drug Designing (FBDD)
De novo Drug Design
Biological Databases
Secondary Structural Elements with special attention to Ramachandran Plot
Potential Energy Surface (PES) and Molecular Graphics
Diagnosis of Genetic Diseases and Infectious Diseases
Softwares for Phylogenetic Analysis- What we expect?