MY RESEARCH PUBLICATIONS

1.    P. Srinivasan, A. Sudha, A. Shahul Hameed, S. Prasanth Kumar and M. Karthikeyan, 2011. Screening of medicinal plant compounds against NS5B polymerase of hepatitis C virus (HCV) using molecular docking studies. Journal of Pharmacy Research 4(1): pp.136-140.

2.      S. Prasanth Kumar, P. Srinivasan, Saumya K. Patel, Ravi Kapopara and Yogesh T. Jasrai, 2011. In silico development of inhibitors against pantothenate synthetase of Mycobacterium tuberculosis. Journal of Advanced Bioinformatics and Research 2(2): pp. 142-148.

3.    Saumya K. Patel, S. Prasanth Kumar, Himanshu A. Pandya, Yogesh T. Jasrai and Mehul I. Patni, 2011. 2D-QSAR analysis of dihydrofolate reductase (DHFR) inhibitors with activity in Toxoplasma gondii and Lactobacillus casei. Journal of Advanced Bioinformatics and Research 2(2): pp.161-166.

4.  S. K. Patel, S. Prasanth Kumar, Y. T. Jasrai, H. A. Pandya and R. M. Rawal, 2011. Computational analysis of naturally occurring marine compounds (NOMC) targeting gap junctions and cell adhesive molecules for the identification of anticancer drug targets. The Journal of Computational Intelligence in Bioinformatics 4(2): pp. 161-171.

5.   S. Prasanth Kumar, 2011. Organic Virtual Library (ORVIL) – A combinatorial library construction based on organic constituents and without scaffold hopping. International Journal of Applied Research on Information Technology and Computing 2(2): pp.57-62.

6.   S. Prasanth Kumar and Muthusamy Meenatchi, 2011. Virtual quantification of protein stability using applied kinetic and thermodynamic parameters. IIOAB Letters 1: pp.21-28.

7.    Ravi Kapopara, S. Prasanth Kumar, Saumya K. Patel, Dhananjay K. Sadhu, Yogesh T. Jasrai, Himanshu A. Pandya and Rakesh M. Rawal, 2011. Virtual screening of natural bioactives in combating cancer through epigenetic modulation. South Asian Journal of Experimental Biology 1(5-S1): pp.12-16.

8.      Pappu Srinivasan, Sivakumar Prasanth Kumar, Muthusamy Karthikeyan, Jeyaram Jeyakanthan, Yogesh T. Jasrai, Himanshu A. Pandya, Rakesh M. Rawal and Saumya K. Patel, 2011. Epitope-based immunoinformatics and molecular docking studies of nucleocapsid protein and ovarian tumor domain of Crimean-Congo hemorrhagic fever virus. Frontiers in Bioinformatics and Computational Biology 2(72): 1-9. doi: 10.3389/fgene.2011.00072. PMID: 22303367; PMC3268625.

                                                                                            

9.   S. Prasanth Kumar, Ravi G. Kapopara, Saumya K. Patel, Mehul I. Patni, Yogesh T. Jasrai, Himanshu A. Pandya and Rakesh M. Rawal, 2011. Molecular descriptor enhancement of a common structure towards the development of α-glucosidase and α-amylase inhibitors for post-prandial hyperglycemia (PPHG). Asian Journal of Biomedical and Pharmaceutical Sciences 1(3): pp.01-12.

10. S. Prasanth Kumar, Ravi G. Kapopara, Yogesh. T. Jasrai and Rakesh M. Rawal, 2012. Computational studies on the interaction of core histone tail domains with CpG island.  International Journal of Pharma and Biosciences 3(1): pp. B581-590.

11.  S. Prasanth Kumar, Ravi G. Kapopara, Saumya K. Patel, Himanshu A. Pandya and Yogesh T. Jasrai, 2012. Conformational Ensemble of Digoxin and Digitoxin and its Interamolecular Energy in Torsional Space. International Journal of Pharmacy and Biological Sciences 2(2): pp. 57-66.  

12.  S. Prasanth Kumar, Ravi G. Kapopara, Mehul I. Patni, Himanshu A. Pandya, Yogesh T. Jasrai and Saumya K. Patel. Exploring the Polymerase Activity of Chikungunya Viral non structural Protein 4 (nsP4) using Molecular Modeling, e-Pharmacophore and Docking Studies. International Journal of Pharmacy and Life Sciences 3(6): pp. 1752-1765.

13.  Saumya Patel, S. Prasanth Kumar and Mehul Patni, 2012. Statistical and Biocomputational Studies on Spondyloarthritis. Tatiana Melnic (Ed), LAP LAMBERT Academic Publishing GmbH & Co. KG, Saarbrűcken, Germany, ISBN: 978-3-659-14306-9.

14.  S. Prasanth Kumar, Saumya K. Patel and Himanshu A. Pandya, 2012. Normal and binding mode analysis of breast cancer resistance protein. Alina Covali (Ed), LAP LAMBERT Academic Publishing GmbH & Co. KG, Saarbrűcken, Germany, ISBN: 978-3-659-15312-9.

15.  Saumya Patel, Prasanth Kumar and Yogesh T. Jasrai, 2012. Molecular Optimization of Calcineurin Inhibitors for Prion Disease: A Pharmacophore Study. Tatiana Melnic (Ed), LAP LAMBERT Academic Publishing GmbH & Co. KG, Saarbrűcken, Germany, ISBN: 978-3-659-15895-7.

16.  S. Prasanth Kumar. CpGP dynamics- The dynamics of CpG island and promoter to validate nucleosomal gene expression. International Journal of Bio-Science and Bio-Technology 4(2): pp. 11-26. Program is accessible at http://cpgpdynamics.webs.com.

17.  S. Prasanth Kumar. Docking and in silico bioavailability analysis of CDK6 flavonol inhibitors and its analogues for acute lymphoblastic leukemia. The Journal of Computational Intelligence in Bioinformatics, Accepted.

18.  S. Prasanth Kumar, Saumya K. Patel, Yogesh T. Jasrai,  Himanshu A. Pandya and P. Srinivasan, 2012. Biocomputational analysis of citrullinated fillagrin sequence repeats for rheumatoid arthritis. Electronic Journal of Biology, 8(2):29-33.

ABSTRACTS PUBLICATION AND POSTERS PRESENTATION:

1. Poster Presented and Recognized as Best Research Work in the 4th Seminar on Modern Laboratory Techniques in Molecular Biology on the topic “in silico Epitope-based Immunoinformatics and Molecular Docking Studies of Nucleocapsid Protein (NP) and Ovarian Tumor (OTU) Domain of Crimean-Congo Haemorrhagic Fever Virus (CCHFV)” held at Gujarat Cancer and Research Institute (GCRI), Ahmedabad on Feb 28, 2011.

2. Presented a work on “Initiation of Eukaryotic Genome Replication: Interaction of RFC and Brd4 proteins” in Tamil National Scientific Conference, held at Alagappa University between Sept 11-13, 2009 and published ISBN-93-80043-33-3

3. S. Prasanth Kumar, Ravi G. Kapopara, Saumya K. Patel, Yogesh T. Jasrai, Himanshu A. Pandya and Rakesh M. Rawal. Emergence of Indian Tomato Yellow Leaf Curl Viral (TYLCV) Disease:  Insights from Evolutionary Divergence and Molecular Prospects of Coat Protein. (Proceedings of the National Symposium on Evolving Paradigm to Improve Productivity from Dynamic Management and Value Addition for Plant Genetic Resources, Theme: Bioinformatics and Use of Newer Technologies, pp. 158).

4. Ravi G. Kapopara, S. Prasanth Kumar, Yogesh T. Jasrai, Himanshu A. Pandya and Rakesh M. Rawal. Management of Diabetes by Developing New Alpha Glucosidase Inhibitors (AGIs). (Proceedings of the National Symposium on Evolving Paradigm to Improve Productivity from Dynamic Management and Value Addition for Plant Genetic Resources, Theme: Bioinformatics and Use of Newer Technologies, pp. 162).

5. Saumya K. Patel, S. Prasanth Kumar, Ravi G. Kapopara, Yogesh T. Jasrai and Himanshu A. Pandya. Plant Bioactive Driven Fragment-based Drug Designing and Epitope-baesd Immunoinformatics Study of EspC protein of Mycobacterium tuberculosis. (Proceedings of the National Symposium on Evolving Paradigm to Improve Productivity from Dynamic Management and Value Addition for Plant Genetic Resources, Theme: Bioinformatics and Use of Newer Technologies, pp. 166).

6. Mehul I. Patni, S. Prasanth Kumar, Saumya K. Patel, Yogesh T. Jasrai and Himanshu A. Pandya. 2D-QSAR Analysis of ACE Inhibitors with Activity in Oryctolagus cuniculus and Rattus norvegicus. (Proceedings of the National Symposium on Evolving Paradigm to Improve Productivity from Dynamic Management and Value Addition for Plant Genetic Resources, Theme: Bioinformatics and Use of Newer Technologies, pp. 167).

7. Vishal H. Desai, Chirag N. Patel, Vijay P. Mehta, S. Prasanth Kumar, Yogesh T. Jasrai and Himanshu A. Pandya. Bioinformatic analysis on Maize sugary1 gene (Proceedings of the National Symposium on Evolving Paradigm to Improve Productivity from Dynamic Management and Value Addition for Plant Genetic Resources, Theme: Budding Researchers, pp. 173).